Classify nucleotide sequences of HIV protease and reverse transcriptase gene into resistant and susceptible to antiretroviral treatment using PASS approach

The classification is based on the analysis of nucleotide sequences the HIV protease or reverse transcriptase gene.

The method of classification is based on the estimation of the occurence F_r and F_s of short nucleotide sequence fragments in the set of genes of Resistant (R) and susceptible (S) HIV variants respectively.

The F_r and F_s values are then processed in the Bayesian-based algorithm PASS, which makes it possible to calculate P_r and P_s values of probability for the particular sequence to belong either to R or S variant.

Upload Sequence*:	sequence_example.fasta
Enzyme encoded:	reverse transcriptase protease both
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Results are saved in the the tab-delimited file containing the rows, each of which has sequence identifier of an uploaded FASTA file, values P_r and P_s. See results_example.txt as an example