Phyto4Health

Ginsenoside Rd

Representations & DB's id
ChEBI: CHEBI:67988
ChEMBL: CHEMBL473659
PubChem: 11679800
IUPAC: (2S,3R,4S,5S,6R)-2-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-[[(3S,5R,8R,9R,10R,12R,13R,14R,17S)-12-hydroxy-4,4,8,10,14-pentamethyl-17-[(2S)-6-methyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhept-5-en-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
Standard InChI: InChI=1S/C48H82O18/c1-22(2)10-9-14-48(8,66-42-39(60)36(57)33(54)26(20-50)62-42)23-11-16-47(7)31(23)24(52)18-29-45(5)15-13-30(44(3,4)28(45)12-17-46(29,47)6)64-43-40(37(58)34(55)27(21-51)63-43)65-41-38(59)35(56)32(53)25(19-49)61-41/h10,23-43,49-60H,9,11-21H2,1-8H3/t23-,24+,25+,26+,27+,28-,29+,30-,31-,32+,33+,34+,35-,36-,37-,38+,39+,40+,41-,42-,43-,45-,46+,47+,48-/m0/s1
Standard InChI Key: RLDVZILFNVRJTL-IWFVLDDISA-N
SMILES: OC[C@H]1O[C@@H](O[C@H]2CC[C@]3([C@H](C2(C)C)CC[C@@]2([C@@H]3C[C@@H](O)[C@H]3[C@@]2(C)CC[C@@H]3[C@@](O[C@@H]2O[C@H](CO)[C@H]([C@@H]([C@H]2O)O)O)(CCC=C(C)C)C)C)C)[C@@H]([C@H]([C@@H]1O)O)O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O

Molecular propeties
AlogP: -0.03
Hydrogen bonds acceptors: 18
Hydrogen bonds donors: 12
Rotatable bonds: 13
Number of rings: 7
Molecular Weight: 946.55
Topological polar surface area: 298
Number of aromatic rings: 0
Fsp3: 0.958
Number of carbons: 48

Plant sources

Part of plant Plant name Ref.
PlantPanax ginseng
PlantPanax ginseng
PlantPanax ginseng

In vitro data

Activity Type Activity Value Target Name UniProt ID Ref.
IC50250000 nMDNA topoisomerase II alphaP11388
IC50250000 nMDNA topoisomerase IP11387