Phyto4Health

Gypenoside Xvii

Representations & DB's id

ChEBI: CHEBI:77155
ChEMBL: CHEMBL504441
PubChem: 44584555
IUPAC: (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[(2S)-2-[(3S,5R,8R,9R,10R,12R,13R,14R,17S)-12-hydroxy-4,4,8,10,14-pentamethyl-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]-6-methylhept-5-en-2-yl]oxyoxan-2-yl]methoxy]oxane-3,4,5-triol
Standard InChI: InChI=1S/C48H82O18/c1-22(2)10-9-14-48(8,66-43-40(60)37(57)34(54)27(64-43)21-61-41-38(58)35(55)32(52)25(19-49)62-41)23-11-16-47(7)31(23)24(51)18-29-45(5)15-13-30(44(3,4)28(45)12-17-46(29,47)6)65-42-39(59)36(56)33(53)26(20-50)63-42/h10,23-43,49-60H,9,11-21H2,1-8H3/t23-,24+,25+,26+,27+,28-,29+,30-,31-,32+,33+,34+,35-,36-,37-,38+,39+,40+,41+,42-,43-,45-,46+,47+,48-/m0/s1
Standard InChI Key: ZRBFCAALKKNCJG-SJYBZOGZSA-N
SMILES: OC[C@H]1O[C@@H](OC[C@H]2O[C@@H](O[C@]([C@H]3CC[C@@]4([C@@H]3[C@H](O)C[C@H]3[C@@]4(C)CC[C@@H]4[C@]3(C)CC[C@@H](C4(C)C)O[C@@H]3O[C@H](CO)[C@H]([C@@H]([C@H]3O)O)O)C)(CCC=C(C)C)C)[C@@H]([C@H]([C@@H]2O)O)O)[C@@H]([C@H]([C@@H]1O)O)O

Molecular propeties

AlogP: -0.03
Hydrogen bonds acceptors: 18
Hydrogen bonds donors: 12
Rotatable bonds: 13
Number of rings: 7
Molecular Weight: 946.55
Topological polar surface area: 298
Number of aromatic rings: 0
Fsp3: 0.958
Number of carbons: 48

Plant sources

Part of plant Plant name Ref.
RadixPanax ginseng

In vitro data

Activity Type Activity Value Target Name UniProt ID Ref.
IC50250000 nMDNA topoisomerase II alphaP11388
IC50250000 nMDNA topoisomerase IP11387
Potency29081 nMATPase family AAA domain-containing protein 5Q96QE3
Others101.9 %Isocitrate dehydrogenase [NADP] cytoplasmicO75874
Others122 %Isocitrate dehydrogenase [NADP] cytoplasmicO75874