Phyto4Health

Garcinone E

Representations & DB's id

ChEBI: None
ChEMBL: CHEMBL454580
PubChem: 10298511
IUPAC: 2,3,6,8-tetrahydroxy-1,4,7-tris(3-methylbut-2-enyl)xanthen-9-one
Standard InChI: InChI=1S/C28H32O6/c1-14(2)7-10-17-20(29)13-21-23(24(17)30)27(33)22-18(11-8-15(3)4)25(31)26(32)19(28(22)34-21)12-9-16(5)6/h7-9,13,29-32H,10-12H2,1-6H3
Standard InChI Key: WVJYEKGQSBGNRP-UHFFFAOYSA-N
SMILES: CC(=CCc1c(O)c(O)c(c2c1c(=O)c1c(o2)cc(c(c1O)CC=C(C)C)O)CC=C(C)C)C

Molecular propeties

AlogP: 6.29
Hydrogen bonds acceptors: 6
Hydrogen bonds donors: 4
Rotatable bonds: 6
Number of rings: 3
Molecular Weight: 464.22
Topological polar surface area: 107
Number of aromatic rings: 3
Fsp3: 0.357
Number of carbons: 28

Plant sources

Part of plant Plant name Ref.
HerbaHypericum perforatum

In vitro data

Activity Type Activity Value Target Name UniProt ID Ref.
Others23.9 %Cytochrome P450 19A1P11511
IC5025100 nMCytochrome P450 19A1P11511
Others32.3 %Cytochrome P450 19A1P11511
Potency28183.8 nMLysine-specific demethylase 4D-likeB2RXH2
Potency22387.2 nMMicrotubule-associated protein tauP10636
Potency14125.4 nMMAP kinase ERK2P28482
Potency28183.8 nMBloom syndrome proteinP54132
Potency44668.4 nMDNA polymerase betaP06746
Potency50118.7 nMLysine-specific demethylase 4AO75164
Potency25929 nMNuclear factor erythroid 2-related factor 2Q16236
Potency50118.7 nMBromodomain adjacent to zinc finger domain protein 2BQ9UIF8
Potency32629.4 nMATPase family AAA domain-containing protein 5Q96QE3
Potency25929 nMGemininO75496
Potency16833.6 nMAtaxin-2Q99700
Potency31622.8 nMGlucagon-like peptide 1 receptorP43220
Potency7079.5 nMGuanine nucleotide-binding protein G(s), subunit alphaP63092
Potency3981.1 nMGlycoprotein hormones alpha chainP01215