Phyto4Health

Silibinin

Representations & DB's id

ChEBI: None
ChEMBL: CHEMBL1401508
PubChem: 5213
IUPAC: 3,5,7-trihydroxy-2-[3-(4-hydroxy-3-methoxyphenyl)-2-(hydroxymethyl)-2,3-dihydro-1,4-benzodioxin-6-yl]-2,3-dihydrochromen-4-one
Standard InChI: InChI=1S/C25H22O10/c1-32-17-6-11(2-4-14(17)28)24-20(10-26)33-16-5-3-12(7-18(16)34-24)25-23(31)22(30)21-15(29)8-13(27)9-19(21)35-25/h2-9,20,23-29,31H,10H2,1H3
Standard InChI Key: SEBFKMXJBCUCAI-UHFFFAOYSA-N
SMILES: OCC1Oc2ccc(cc2OC1c1ccc(c(c1)OC)O)C1Oc2cc(O)cc(c2C(=O)C1O)O

Molecular propeties

AlogP: 2.36
Hydrogen bonds acceptors: 10
Hydrogen bonds donors: 5
Rotatable bonds: 4
Number of rings: 5
Molecular Weight: 482.12
Topological polar surface area: 155
Number of aromatic rings: 3
Fsp3: 0.24
Number of carbons: 25

Plant sources

Part of plant Plant name Ref.
PlantSilybum marianum

In vitro data

Activity Type Activity Value Target Name UniProt ID Ref.
Others14 %Canalicular multispecific organic anion transporter 1Q92887
Ki1490 nMCarbonic anhydrase IP00915
Ki2510 nMCarbonic anhydrase IIP00918
Ki6430 nMCarbonic anhydrase IIIP07451
Ki8960 nMCarbonic anhydrase IVP22748
Ki4080 nMCarbonic anhydrase VAP35218
Ki4560 nMCarbonic anhydrase VBQ9Y2D0
Ki9700 nMCarbonic anhydrase VIP23280
Ki4710 nMCarbonic anhydrase VIIP43166
Ki10150 nMCarbonic anhydrase IXQ16790
Ki9050 nMCarbonic anhydrase XIIO43570
Ki4820 nMCarbonic anhydrase XIIIQ8N1Q1
Ki11640 nMCarbonic anhydrase XIVQ9ULX7
Potency17.8 nMPrelamin-A/CP02545
Potency31622.8 nMEndoplasmic reticulum-associated amyloid beta-peptide-binding proteinQ99714
Potency1995.3 nMTyrosyl-DNA phosphodiesterase 1Q9NUW8
Potency2511.9 nMThyroid stimulating hormone receptorP16473
Potency22387.2 nMMicrotubule-associated protein tauP10636
Potency12589.3 nMHypoxia-inducible factor 1 alphaQ16665
Potency14125.4 nMAldehyde dehydrogenase 1A1P00352
Potency39810.7 nMArachidonate 15-lipoxygenaseP16050
Potency25118.9 nMArachidonate 15-lipoxygenaseP16050
Potency12589.3 nMHypoxia-inducible factor 1 alphaQ16665
Potency2511.9 nMThyroid stimulating hormone receptorP16473
Potency15848.9 nM15-hydroxyprostaglandin dehydrogenase [NAD+]P15428
Potency31622.8 nMEndoplasmic reticulum-associated amyloid beta-peptide-binding proteinQ99714
Potency15848.9 nMCellular tumor antigen p53P04637
Potency35481.3 nMLysosomal alpha-glucosidaseP10253
Potency10000 nMCytochrome P450 3A4P08684
Potency12589.3 nMCytochrome P450 3A4P08684
Potency10000 nMCytochrome P450 3A4P08684
Potency12589.3 nMCytochrome P450 3A4P08684
Potency25118.9 nMBeta-glucocerebrosidaseP04062
Potency28183.8 nMBeta-glucocerebrosidaseP04062
Potency50118.7 nMHistone-lysine N-methyltransferase, H3 lysine-9 specific 3Q96KQ7
Potency89125.1 nMBromodomain adjacent to zinc finger domain protein 2BQ9UIF8
Ki5000 nMCytochrome P450 2C9P11712
Ki32000 nMCytochrome P450 3A4P08684
Ki132000 nMCytochrome P450 3A4P08684
Potency25929 nMGemininO75496
Potency74978 nMNuclear factor erythroid 2-related factor 2Q16236
Potency35481.3 nMGlutaminase kidney isoform, mitochondrialO94925
Potency206 nMGemininO75496
Potency66824.2 nMInterleukin-8P10145
Potency18833.6 nMNuclear receptor ROR-gammaP51449
IC5021000 nMUrokinase-type plasminogen activatorP00749
IC5020900 nMThrombinP00734
Kd18600 nMThrombinP00734
Others43 %ThrombinP00734
IC5025000 nMThrombinP00734
Others42.4 %Xanthine dehydrogenaseP47989
IC509700 nMSolute carrier organic anion transporter family member 1B1Q9Y6L6
IC502700 nMSolute carrier organic anion transporter family member 1B3Q9NPD5
IC504500 nMSolute carrier organic anion transporter family member 2B1O94956