Phyto4Health

(9R)-9-[(9R)-2-Carboxy-4-Hydroxy-10-Oxo-5-[(3R,4S,5S,6R)-3,4,5-Trihydroxy-6-(Hydroxymethyl)Oxan-2-Yl]Oxy-9H-Anthracen-9-Yl]-4-Hydroxy-10-Oxo-5-[(2S,3R,4S,5S,6R)-3,4,5-Trihydroxy-6-(Hydroxymethyl)Oxan-2-Yl]Oxy-9H-Anthracene-2-Carboxylic Acid

Representations & DB's id

ChEBI: None
ChEMBL: CHEMBL1362935
PubChem: 16218404
IUPAC: (9R)-9-[(9R)-2-carboxy-4-hydroxy-10-oxo-5-[(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-9H-anthracen-9-yl]-4-hydroxy-10-oxo-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-9H-anthracene-2-carboxylic acid
Standard InChI: InChI=1S/C42H38O20/c43-11-23-31(47)35(51)37(53)41(61-23)59-21-5-1-3-15-25(17-7-13(39(55)56)9-19(45)27(17)33(49)29(15)21)26-16-4-2-6-22(60-42-38(54)36(52)32(48)24(12-44)62-42)30(16)34(50)28-18(26)8-14(40(57)58)10-20(28)46/h1-10,23-26,31-32,35-38,41-48,51-54H,11-12H2,(H,55,56)(H,57,58)/t23-,24-,25-,26-,31-,32-,35+,36+,37-,38-,41-,42?/m1/s1
Standard InChI Key: IPQVTOJGNYVQEO-GTCVFCFLSA-N
SMILES: OC[C@H]1OC(Oc2cccc3c2C(=O)c2c([C@@H]3[C@H]3c4cc(cc(c4C(=O)c4c3cccc4O[C@@H]3O[C@H](CO)[C@H]([C@@H]([C@H]3O)O)O)O)C(=O)O)cc(cc2O)C(=O)O)[C@@H]([C@H]([C@@H]1O)O)O

Molecular propeties

AlogP: -1.1
Hydrogen bonds acceptors: 18
Hydrogen bonds donors: 12
Rotatable bonds: 9
Number of rings: 8
Molecular Weight: 862.2
Topological polar surface area: 348
Number of aromatic rings: 4
Fsp3: 0.286
Number of carbons: 42

Plant sources

Part of plant Plant name Ref.
PlantRheum palmatum
PlantRheum palmatum
PlantCassia acutifolia

In vitro data

Activity Type Activity Value Target Name UniProt ID Ref.
Potency4466.8 nMUbiquitin carboxyl-terminal hydrolase 2O75604
Potency158.5 nMLethal(3)malignant brain tumor-like protein 1Q9Y468
Potency316.2 nMLysine-specific demethylase 4AO75164
Potency18356.4 nMNuclear factor erythroid 2-related factor 2Q16236
IC501610 nMPutative hexokinase HKDC1Q2TB90
Potency707.9 nMHistone acetyltransferase GCN5Q92830
IC5080000 nMPutative hexokinase HKDC1Q2TB90
Potency1258.9 nMHistone-lysine N-methyltransferase, H3 lysine-9 specific 3Q96KQ7
Potency794.3 nMBromodomain adjacent to zinc finger domain protein 2BQ9UIF8
Potency17782.8 nMATPase family AAA domain-containing protein 5Q96QE3
Potency730.8 nMGemininO75496
Potency39810.7 nMTranscriptional regulator ERGP11308
Potency446.7 nMGlutaminase kidney isoform, mitochondrialO94925
Potency1258.9 nMGemininO75496
Potency28183.8 nMAtaxin-2Q99700
Potency3981.1 nMWerner syndrome ATP-dependent helicaseQ14191
Potency39810.7 nMTranscriptional regulator ERGP11308