Phyto4Health

Berberrubine

Representations & DB's id

ChEBI: None
ChEMBL: CHEMBL203135
PubChem: 72704
IUPAC: 17-methoxy-5,7-dioxa-13-azoniapentacyclo[11.8.0.02,10.04,8.015,20]henicosa-1(13),2,4(8),9,14,16,18,20-octaen-16-ol
Standard InChI: InChI=1S/C19H15NO4/c1-22-16-3-2-11-6-15-13-8-18-17(23-10-24-18)7-12(13)4-5-20(15)9-14(11)19(16)21/h2-3,6-9H,4-5,10H2,1H3/p+1
Standard InChI Key: GLYPKDKODVRYGP-UHFFFAOYSA-O
SMILES: COC1=CC=c2c(C1=O)c[n+]1c(c2)c2cc3OCOc3cc2CC1

Molecular propeties

AlogP: 2.79
Hydrogen bonds acceptors: 4
Hydrogen bonds donors: 1
Rotatable bonds: 1
Number of rings: 5
Molecular Weight: 322.11
Topological polar surface area: 51.8
Number of aromatic rings: 3
Fsp3: 0.211
Number of carbons: 19

Plant sources

Part of plant Plant name Ref.
RootBerberis vulgaris
BarkBerberis vulgaris
PlantBerberis vulgaris
RootBerberis vulgaris
BarkBerberis vulgaris
PlantBerberis vulgaris

In vitro data

Activity Type Activity Value Target Name UniProt ID Ref.
Potency10000 nMGlutaminase kidney isoform, mitochondrialO94925
Potency12589.3 nMAtaxin-2Q99700
Potency50118.7 nMWerner syndrome ATP-dependent helicaseQ14191