Phyto4Health

Berbamine

Representations & DB's id

ChEBI: CHEBI:3063
ChEMBL: CHEMBL504323
PubChem: 275182
IUPAC: (1S,14R)-20,21,25-trimethoxy-15,30-dimethyl-7,23-dioxa-15,30-diazaheptacyclo[22.6.2.23,6.18,12.114,18.027,31.022,33]hexatriaconta-3(36),4,6(35),8,10,12(34),18,20,22(33),24,26,31-dodecaen-9-ol
Standard InChI: InChI=1S/C37H40N2O6/c1-38-14-12-24-19-32(41-3)33-21-27(24)28(38)16-22-6-9-26(10-7-22)44-31-18-23(8-11-30(31)40)17-29-35-25(13-15-39(29)2)20-34(42-4)36(43-5)37(35)45-33/h6-11,18-21,28-29,40H,12-17H2,1-5H3/t28-,29+/m0/s1
Standard InChI Key: DFOCUWZXJBAUSQ-URLMMPGGSA-N
SMILES: COc1c(OC)cc2c3c1Oc1cc4c(cc1OC)CCN([C@H]4Cc1ccc(Oc4cc(C[C@H]3N(CC2)C)ccc4O)cc1)C

Molecular propeties

AlogP: 6.86
Hydrogen bonds acceptors: 8
Hydrogen bonds donors: 1
Rotatable bonds: 3
Number of rings: 8
Molecular Weight: 608.29
Topological polar surface area: 72.9
Number of aromatic rings: 4
Fsp3: 0.351
Number of carbons: 37

Plant sources

Part of plant Plant name Ref.
BarkBerberis vulgaris
Root BarkBerberis vulgaris
Stem BarkBerberis vulgaris
PlantBerberis vulgaris
RootBerberis vulgaris
PlantSphaerophysa salsula
PlantPopulus balsamifera

In vitro data

Activity Type Activity Value Target Name UniProt ID Ref.
Potency31622.8 nMEndoplasmic reticulum-associated amyloid beta-peptide-binding proteinQ99714
Potency19952.6 nMCytochrome P450 3A4P08684
Potency19952.6 nMCytochrome P450 3A4P08684
Potency15848.9 nMArachidonate 15-lipoxygenase, type IIO15296
Others5 %Telomerase reverse transcriptaseO14746