Phyto4Health

(-)-Epicatechin

Representations & DB's id

ChEBI: CHEBI:90
ChEMBL: CHEMBL583912
PubChem: 72276
IUPAC: (2R,3R)-2-(3,4-dihydroxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol
Standard InChI: InChI=1S/C15H14O6/c16-8-4-11(18)9-6-13(20)15(21-14(9)5-8)7-1-2-10(17)12(19)3-7/h1-5,13,15-20H,6H2/t13-,15-/m1/s1
Standard InChI Key: PFTAWBLQPZVEMU-UKRRQHHQSA-N
SMILES: Oc1cc2O[C@H](c3ccc(c(c3)O)O)[C@@H](Cc2c(c1)O)O

Molecular propeties

AlogP: 1.55
Hydrogen bonds acceptors: 6
Hydrogen bonds donors: 5
Rotatable bonds: 1
Number of rings: 3
Molecular Weight: 290.08
Topological polar surface area: 110
Number of aromatic rings: 2
Fsp3: 0.2
Number of carbons: 15

Plant sources

Part of plant Plant name Ref.
SeedVitis vinifera
LeafVitis vinifera
PericarpVitis vinifera
FruitVitis vinifera
PlantPolygonum bistorta
PlantPunica granatum
PlantQuercus robur
PlantHypericum perforatum
PlantHypericum perforatum
PlantRheum palmatum
PlantGlycyrrhiza uralensis
LeafVaccinium vitis-idaea
PlantThymus vulgaris
FruitHumulus lupulus
FruitHumulus lupulus
StemCamellia sinensis
FlowerCamellia sinensis
Tissue CultureCamellia sinensis
LeafCamellia sinensis

In vitro data

Activity Type Activity Value Target Name UniProt ID Ref.
IC50100000 nMFatty acid synthaseP49327
Others10.2 %Fatty acid synthaseP49327
Others10.3 %Salivary alpha-amylaseP04745
Potency28.2 nMNuclear factor NF-kappa-B p105 subunitP19838
Potency11220.2 nMLysine-specific demethylase 4D-likeB2RXH2
Potency22387.2 nMLysine-specific demethylase 4D-likeB2RXH2
Potency31622.8 nMThyroid stimulating hormone receptorP16473
Potency28.2 nMNuclear factor NF-kappa-B p105 subunitP19838
Potency31622.8 nMThyroid stimulating hormone receptorP16473
Potency1000 nMEndoplasmic reticulum-associated amyloid beta-peptide-binding proteinQ99714
Potency1584.9 nMEndoplasmic reticulum-associated amyloid beta-peptide-binding proteinQ99714
Potency10000 nMLysosomal alpha-glucosidaseP10253
Potency12589.3 nMCytochrome P450 3A4P08684
IC5059642 nMCathepsin LP07711
Potency12589.3 nMCytochrome P450 3A4P08684
EC5051300 nMAlkaline phosphatase placental-likeP10696
EC50100000 nMIntestinal alkaline phosphataseP09923
Potency10000 nMHistone-lysine N-methyltransferase, H3 lysine-9 specific 3Q96KQ7
Potency3162.3 nMHistone-lysine N-methyltransferase, H3 lysine-9 specific 3Q96KQ7
Potency100000 nMBromodomain adjacent to zinc finger domain protein 2BQ9UIF8
IC50407 nMAlkaline phosphatase, tissue-nonspecific isozymeP05186
IC50205620 nMRac GTPase-activating protein 1Q9H0H5
Ki100000 nMApoptosis regulator Bcl-2P10415
IC50200000 nMMicrotubule-associated protein tauP10636
Kd5190000 nMThrombinP00734
IC50150000 nMThrombinP00734